Characterizing Load and Communication Imbalance in Parallel Applications

Characterizing Load and Communication Imbalance in Parallel Applications PDF Author: David Böhme
Publisher: Forschungszentrum Jülich
ISBN: 3893369406
Category :
Languages : en
Pages : 135

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Book Description

Characterizing Load and Communication Imbalance in Parallel Applications

Characterizing Load and Communication Imbalance in Parallel Applications PDF Author: David Böhme
Publisher: Forschungszentrum Jülich
ISBN: 3893369406
Category :
Languages : en
Pages : 135

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Book Description


Performance Analysis of Parallel Applications for HPC

Performance Analysis of Parallel Applications for HPC PDF Author: Jidong Zhai
Publisher: Springer Nature
ISBN: 9819943663
Category : Computers
Languages : en
Pages : 259

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Book Description
This book presents a hybrid static-dynamic approach for efficient performance analysis of parallel applications on HPC systems. Performance analysis is essential to finding performance bottlenecks and understanding the performance behaviors of parallel applications on HPC systems. However, current performance analysis techniques usually incur significant overhead. Our book introduces a series of approaches for lightweight performance analysis. We combine static and dynamic analysis to reduce the overhead of performance analysis. Based on this hybrid static-dynamic approach, we then propose several innovative techniques for various performance analysis scenarios, including communication analysis, memory analysis, noise analysis, computation analysis, and scalability analysis. Through these specific performance analysis techniques, we convey to readers the idea of using static analysis to support dynamic analysis. To gain the most from the book, readers should have a basic grasp of parallel computing, computer architecture, and compilation techniques.

Supercomputing

Supercomputing PDF Author: Vladimir Voevodin
Publisher: Springer Nature
ISBN: 303122941X
Category : Computers
Languages : en
Pages : 713

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Book Description
This book constitutes the refereed proceedings of the 8th Russian Supercomputing Days on Supercomputing, RuSCDays 2022, which took place in Moscow, Russia, in September 2022. The 49 full papers and 1 short paper presented in this volume were carefully reviewed and selected from 94 submissions. The papers are organized in the following topical sections: Supercomputer Simulation; HPC, BigData, AI: Architectures, Technologies, Tools; Distributed and Cloud Computing.

Sustained Simulation Performance 2019 and 2020

Sustained Simulation Performance 2019 and 2020 PDF Author: Michael M. Resch
Publisher: Springer Nature
ISBN: 3030680495
Category : Computers
Languages : en
Pages : 187

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Book Description
This book presents the state of the art in High Performance Computing on modern supercomputer architectures. It addresses trends in hardware and software development in general. The contributions cover a broad range of topics, from performance evaluations in context with power efficiency to Computational Fluid Dynamics and High Performance Data Analytics. In addition, they explore new topics like the use of High Performance Computers in the field of Artificial Intelligence and Machine Learning. All contributions are based on selected papers presented at the 30th Workshop on Sustained Simulation Performance (WSSP) held at the High Performance Computing Center, University of Stuttgart, Germany in October 2019 and on the papers for the planned Workshop on Sustained Simulation Performance in March 2020, which could not take place due to the Covid-19 pandemic.

Numerical simulation of gas-induced orbital decay of binary systems in young clusters

Numerical simulation of gas-induced orbital decay of binary systems in young clusters PDF Author: Christina Korntreff
Publisher: Forschungszentrum Jülich
ISBN: 3893369791
Category :
Languages : en
Pages : 117

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Automated Optimization Methods for Scientific Workflows in e-Science Infrastructures

Automated Optimization Methods for Scientific Workflows in e-Science Infrastructures PDF Author: Sonja Holl
Publisher: Forschungszentrum Jülich
ISBN: 389336949X
Category :
Languages : en
Pages : 207

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Book Description
Scientific workflows have emerged as a key technology that assists scientists with the design, management, execution, sharing and reuse of in silico experiments. Workflow management systems simplify the management of scientific workflows by providing graphical interfaces for their development, monitoring and analysis. Nowadays, e-Science combines such workflow management systems with large-scale data and computing resources into complex research infrastructures. For instance, e-Science allows the conveyance of best practice research in collaborations by providing workflow repositories, which facilitate the sharing and reuse of scientific workflows. However, scientists are still faced with different limitations while reusing workflows. One of the most common challenges they meet is the need to select appropriate applications and their individual execution parameters. If scientists do not want to rely on default or experience-based parameters, the best-effort option is to test different workflow set-ups using either trial and error approaches or parameter sweeps. Both methods may be inefficient or time consuming respectively, especially when tuning a large number of parameters. Therefore, scientists require an effective and efficient mechanism that automatically tests different workflow set-ups in an intelligent way and will help them to improve their scientific results. This thesis addresses the limitation described above by defining and implementing an approach for the optimization of scientific workflows. In the course of this work, scientists’ needs are investigated and requirements are formulated resulting in an appropriate optimization concept. In a following step, this concept is prototypically implemented by extending a workflow management system with an optimization framework, including general mechanisms required to conduct workflow optimization. As optimization is an ongoing research topic, different algorithms are provided by pluggable extensions (plugins) that can be loosely coupled with the framework, resulting in a generic and quickly extendable system. In this thesis, an exemplary plugin is introduced which applies a Genetic Algorithm for parameter optimization. In order to accelerate and therefore make workflow optimization feasible at all, e-Science infrastructures are utilized for the parallel execution of scientific workflows. This is empowered by additional extensions enabling the execution of applications and workflows on distributed computing resources. The actual implementation and therewith the general approach of workflow optimization is experimentally verified by four use cases in the life science domain. All workflows were significantly improved, which demonstrates the advantage of the proposed workflow optimization. Finally, a new collaboration-based approach is introduced that harnesses optimization provenance to make optimization faster and more robust in the future.

Algorithms and Architectures for Parallel Processing

Algorithms and Architectures for Parallel Processing PDF Author: Guojun Wang
Publisher: Springer
ISBN: 3319271407
Category : Computers
Languages : en
Pages : 880

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Book Description
This four volume set LNCS 9528, 9529, 9530 and 9531 constitutes the refereed proceedings of the 15th International Conference on Algorithms and Architectures for Parallel Processing, ICA3PP 2015, held in Zhangjiajie, China, in November 2015. The 219 revised full papers presented together with 77 workshop papers in these four volumes were carefully reviewed and selected from 807 submissions (602 full papers and 205 workshop papers). The first volume comprises the following topics: parallel and distributed architectures; distributed and network-based computing and internet of things and cyber-physical-social computing. The second volume comprises topics such as big data and its applications and parallel and distributed algorithms. The topics of the third volume are: applications of parallel and distributed computing and service dependability and security in distributed and parallel systems. The covered topics of the fourth volume are: software systems and programming models and performance modeling and evaluation.

Characterizing the Parallel Performance and Soft Error Resilience of Probabilistic Inference Algorithms

Characterizing the Parallel Performance and Soft Error Resilience of Probabilistic Inference Algorithms PDF Author: Vicky W. Wong
Publisher:
ISBN:
Category :
Languages : en
Pages : 138

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Book Description


Advanced Computational Infrastructures for Parallel and Distributed Adaptive Applications

Advanced Computational Infrastructures for Parallel and Distributed Adaptive Applications PDF Author: Manish Parashar
Publisher: John Wiley & Sons
ISBN: 0470558016
Category : Computers
Languages : en
Pages : 542

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Book Description
A unique investigation of the state of the art in design, architectures, and implementations of advanced computational infrastructures and the applications they support Emerging large-scale adaptive scientific and engineering applications are requiring an increasing amount of computing and storage resources to provide new insights into complex systems. Due to their runtime adaptivity, these applications exhibit complicated behaviors that are highly dynamic, heterogeneous, and unpredictable—and therefore require full-fledged computational infrastructure support for problem solving, runtime management, and dynamic partitioning/balancing. This book presents a comprehensive study of the design, architecture, and implementation of advanced computational infrastructures as well as the adaptive applications developed and deployed using these infrastructures from different perspectives, including system architects, software engineers, computational scientists, and application scientists. Providing insights into recent research efforts and projects, the authors include descriptions and experiences pertaining to the realistic modeling of adaptive applications on parallel and distributed systems. The first part of the book focuses on high-performance adaptive scientific applications and includes chapters that describe high-impact, real-world application scenarios in order to motivate the need for advanced computational engines as well as to outline their requirements. The second part identifies popular and widely used adaptive computational infrastructures. The third part focuses on the more specific partitioning and runtime management schemes underlying these computational toolkits. Presents representative problem-solving environments and infrastructures, runtime management strategies, partitioning and decomposition methods, and adaptive and dynamic applications Provides a unique collection of selected solutions and infrastructures that have significant impact with sufficient introductory materials Includes descriptions and experiences pertaining to the realistic modeling of adaptive applications on parallel and distributed systems The cross-disciplinary approach of this reference delivers a comprehensive discussion of the requirements, design challenges, underlying design philosophies, architectures, and implementation/deployment details of advanced computational infrastructures. It makes it a valuable resource for advanced courses in computational science and software/systems engineering for senior undergraduate and graduate students, as well as for computational and computer scientists, software developers, and other industry professionals.

Parallel Processing for Scientific Computing

Parallel Processing for Scientific Computing PDF Author: Michael A. Heroux
Publisher: SIAM
ISBN: 0898716195
Category : Computers
Languages : en
Pages : 407

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Book Description
Scientific computing has often been called the third approach to scientific discovery, emerging as a peer to experimentation and theory. Historically, the synergy between experimentation and theory has been well understood: experiments give insight into possible theories, theories inspire experiments, experiments reinforce or invalidate theories, and so on. As scientific computing has evolved to produce results that meet or exceed the quality of experimental and theoretical results, it has become indispensable.Parallel processing has been an enabling technology in scientific computing for more than 20 years. This book is the first in-depth discussion of parallel computing in 10 years; it reflects the mix of topics that mathematicians, computer scientists, and computational scientists focus on to make parallel processing effective for scientific problems. Presently, the impact of parallel processing on scientific computing varies greatly across disciplines, but it plays a vital role in most problem domains and is absolutely essential in many of them. Parallel Processing for Scientific Computing is divided into four parts: The first concerns performance modeling, analysis, and optimization; the second focuses on parallel algorithms and software for an array of problems common to many modeling and simulation applications; the third emphasizes tools and environments that can ease and enhance the process of application development; and the fourth provides a sampling of applications that require parallel computing for scaling to solve larger and realistic models that can advance science and engineering. This edited volume serves as an up-to-date reference for researchers and application developers on the state of the art in scientific computing. It also serves as an excellent overview and introduction, especially for graduate and senior-level undergraduate students interested in computational modeling and simulation and related computer science and applied mathematics aspects.Contents List of Figures; List of Tables; Preface; Chapter 1: Frontiers of Scientific Computing: An Overview; Part I: Performance Modeling, Analysis and Optimization. Chapter 2: Performance Analysis: From Art to Science; Chapter 3: Approaches to Architecture-Aware Parallel Scientific Computation; Chapter 4: Achieving High Performance on the BlueGene/L Supercomputer; Chapter 5: Performance Evaluation and Modeling of Ultra-Scale Systems; Part II: Parallel Algorithms and Enabling Technologies. Chapter 6: Partitioning and Load Balancing; Chapter 7: Combinatorial Parallel and Scientific Computing; Chapter 8: Parallel Adaptive Mesh Refinement; Chapter 9: Parallel Sparse Solvers, Preconditioners, and Their Applications; Chapter 10: A Survey of Parallelization Techniques for Multigrid Solvers; Chapter 11: Fault Tolerance in Large-Scale Scientific Computing; Part III: Tools and Frameworks for Parallel Applications. Chapter 12: Parallel Tools and Environments: A Survey; Chapter 13: Parallel Linear Algebra Software; Chapter 14: High-Performance Component Software Systems; Chapter 15: Integrating Component-Based Scientific Computing Software; Part IV: Applications of Parallel Computing. Chapter 16: Parallel Algorithms for PDE-Constrained Optimization; Chapter 17: Massively Parallel Mixed-Integer Programming; Chapter 18: Parallel Methods and Software for Multicomponent Simulations; Chapter 19: Parallel Computational Biology; Chapter 20: Opportunities and Challenges for Parallel Computing in Science and Engineering; Index.